Packages
com.jhlabs.image  
net.iharder  
net.sf.taverna.example  
net.sf.taverna.perspectives  
net.sf.taverna.raven Base Raven package - contains the utility classes.
net.sf.taverna.raven.appconfig  
net.sf.taverna.raven.appconfig.bootstrap  
net.sf.taverna.raven.appconfig.config  
net.sf.taverna.raven.helloworld  
net.sf.taverna.raven.launcher  
net.sf.taverna.raven.log  
net.sf.taverna.raven.plugins  
net.sf.taverna.raven.plugins.event  
net.sf.taverna.raven.plugins.ui  
net.sf.taverna.raven.prelauncher  
net.sf.taverna.raven.profile  
net.sf.taverna.raven.profile.ui  
net.sf.taverna.raven.repository Contains classes and interfaces to represent Artifacts and the local repository structure which contains them.
net.sf.taverna.raven.repository.impl Implementations of the interfaces within the repository package.
net.sf.taverna.raven.spi Listeners used to bind to a Repository and provide monitoring of that Repository for implementations of a particular Service Provider Interface (SPI).
net.sf.taverna.raven.util  
net.sf.taverna.t2.lang.io  
net.sf.taverna.t2.lang.observer Implementation of the observer pattern.
net.sf.taverna.t2.lang.ui  
net.sf.taverna.t2.lang.ui.icons  
net.sf.taverna.t2.partition  
net.sf.taverna.t2.partition.algorithms  
net.sf.taverna.t2.partition.ui  
net.sf.taverna.t2.spi Contains classes that deal with discovery of SPI's through an interaction with the Raven artifact framework.
net.sf.taverna.t2.util.beanable  
net.sf.taverna.t2.util.beanable.jaxb  
net.sf.taverna.tools  
net.sf.taverna.update.plugin  
net.sf.taverna.update.plugin.event  
net.sf.taverna.update.plugin.ui  
net.sf.taverna.update.profile  
net.sf.taverna.update.profile.ui  
net.sf.taverna.utils  
net.sf.taverna.x2008.xml.plugins  
net.sf.taverna.x2008.xml.plugins.impl  
net.sf.taverna.zaria  
net.sf.taverna.zaria.progress  
net.sf.taverna.zaria.raven  
net.sourceforge.taverna.baclava  
net.sourceforge.taverna.biojava  
net.sourceforge.taverna.io  
net.sourceforge.taverna.publish Provides the basis for workflow publishing using a variety of different file systems including Local network drives, and WebDAV repositories.
net.sourceforge.taverna.publish.local Provides classes related to publishing files to a local or network drive repository.
net.sourceforge.taverna.publish.p2p Provides publishing capabilites for a SFTP repository.
net.sourceforge.taverna.publish.sftp Provides publishing capabilites for a SFTP repository.
net.sourceforge.taverna.publish.webdav Provides publishing capabilites for a WebDAV repository.
net.sourceforge.taverna.scuflui.renderers  
net.sourceforge.taverna.scuflworkers  
net.sourceforge.taverna.scuflworkers.biojava Provides BioJava-based LocalWorkers capable of sequence transcription, translation, and file parsing.
net.sourceforge.taverna.scuflworkers.bsf Provides LocalWorkers capable of handling scripts written in any Bean Scripting Framework language.
net.sourceforge.taverna.scuflworkers.image  
net.sourceforge.taverna.scuflworkers.io Provides LocalWorkers capable of reading and writing different types of files.
net.sourceforge.taverna.scuflworkers.jdbc Provides LocalWorkers capable of executing SQL PreparedStatements.
net.sourceforge.taverna.scuflworkers.ncbi Provides LocalWorkers capable of querying data from the NCBI databases.
net.sourceforge.taverna.scuflworkers.ui Provides LocalWorkers capable of getting input from a user, or providing feedback to a user.
net.sourceforge.taverna.scuflworkers.xml  
net.sourceforge.taverna.util  
nl.utwente.ewi.hmi.taverna.scuflworkers.abstractprocessor  
nl.utwente.ewi.hmi.taverna.scuflworkers.rshell  
org.apache.bsf  
org.biomoby.client.taverna.plugin  
org.biomoby.client.taverna.plugin.test  
org.embl.ebi.escience.baclava Provides the data model for the Taverna workflow system.
org.embl.ebi.escience.baclava.factory  
org.embl.ebi.escience.baclava.iterator  
org.embl.ebi.escience.baclava.lsid  
org.embl.ebi.escience.baclava.store Defines the API that data stores must implement to handle DataThing storage and retrieval.
org.embl.ebi.escience.baclava.store.test Tests the storage API and implementation.
org.embl.ebi.escience.baclava.tools Simple tools for the manipulation or visualization of DataThing instances
org.embl.ebi.escience.scufl Provides the object model for the Simple Conceptual Unified Flow Language (Scufl).
org.embl.ebi.escience.scufl.enactor Provides a simple facade layer to allow invocation of either an in memory instance of the workflow enactor or a remote and potentially federated cluster of enactor services.
org.embl.ebi.escience.scufl.enactor.event  
org.embl.ebi.escience.scufl.enactor.implementation Implementations of the various enactor proxy interfaces, these classes perform the communication between proxy interface and real enactor instance, wherever that may be.
org.embl.ebi.escience.scufl.parser Provides functionality to populate ScuflModel instances from textual and XML dialects of the Scufl language.
org.embl.ebi.escience.scufl.provenance.process Provides an API for querying and extracting process provenance information from a running workflow instance.
org.embl.ebi.escience.scufl.semantics  
org.embl.ebi.escience.scufl.shared  
org.embl.ebi.escience.scufl.tools Provides user level command line and graphical tools to manipulate and display scufl model instances.
org.embl.ebi.escience.scufl.view Provides classes that present a view on a ScuflModel instance.
org.embl.ebi.escience.scuflui Provides Java Swing components that show or allow manipulation of subsets of the ScuflModel state.
org.embl.ebi.escience.scuflui.actions  
org.embl.ebi.escience.scuflui.dnd  
org.embl.ebi.escience.scuflui.facets Provides a Service Provider Interface (SPI) for decomposing objects into data facets.
org.embl.ebi.escience.scuflui.graph  
org.embl.ebi.escience.scuflui.graph.model  
org.embl.ebi.escience.scuflui.renderers Provides a Service Provider Interface (SPI) for rendering the data in a workflow.
org.embl.ebi.escience.scuflui.results  
org.embl.ebi.escience.scuflui.shared  
org.embl.ebi.escience.scuflui.spi  
org.embl.ebi.escience.scuflui.treeview  
org.embl.ebi.escience.scuflui.workbench  
org.embl.ebi.escience.scuflui.workbench.scavenger.spi  
org.embl.ebi.escience.scuflworkers  
org.embl.ebi.escience.scuflworkers.apiconsumer  
org.embl.ebi.escience.scuflworkers.beanshell  
org.embl.ebi.escience.scuflworkers.biomart  
org.embl.ebi.escience.scuflworkers.biomoby  
org.embl.ebi.escience.scuflworkers.dependency  
org.embl.ebi.escience.scuflworkers.inferno  
org.embl.ebi.escience.scuflworkers.java  
org.embl.ebi.escience.scuflworkers.java.actions  
org.embl.ebi.escience.scuflworkers.notification  
org.embl.ebi.escience.scuflworkers.rdfgenerator  
org.embl.ebi.escience.scuflworkers.rserv  
org.embl.ebi.escience.scuflworkers.soaplab  
org.embl.ebi.escience.scuflworkers.soaplab.test  
org.embl.ebi.escience.scuflworkers.stringconstant  
org.embl.ebi.escience.scuflworkers.talisman  
org.embl.ebi.escience.scuflworkers.talisman.test  
org.embl.ebi.escience.scuflworkers.web  
org.embl.ebi.escience.scuflworkers.workflow  
org.embl.ebi.escience.scuflworkers.wsdl  
org.embl.ebi.escience.treetable  
org.embl.ebi.escience.utils  
uk.ac.soton.itinnovation.taverna.enactor.broker Provides classes associated with taking an XScufl workflow definition, converting it to the myGrid enactor conceptual model and submitting it to the core enactor module.
uk.ac.soton.itinnovation.taverna.enactor.entities Provides all the Taverna specific tasks that are executable by the myGrid workflow enactor core.