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| Class Summary | |
|---|---|
| AddParserAction | An action to add a parser from within the Workflow editor |
| BiomobyAction | |
| BiomobyObjectAction | |
| BiomobyObjectProcessor | |
| BiomobyObjectProcessorFactory | |
| BiomobyObjectProcessorInfoBean | Provides information about the BiomobyObject Processor plugin, using taverna.properties, identified by the tag 'biomobyobject' |
| BiomobyObjectScavenger | Deprecated. |
| BiomobyObjectScavengerHelper | Deprecated. |
| BiomobyObjectTask | |
| BiomobyObjectTaskTest | |
| BioMobyObjectTreeCustomRenderer | |
| BiomobyObjectXMLHandler | |
| BiomobyParserProcessorTest | |
| BiomobyProcessor | A processor based on the Biomoby compliant web services. |
| BiomobyProcessorFactory | Implementation of ProcessorFactory that creates BiomobyProcessor nodes. |
| BiomobyProcessorInfoBean | Provides information about the Biomoby Processor plugin, using taverna.properties, identified by the tag 'biomobywsdl' |
| BiomobyProcessorTest | |
| BiomobyScavenger | A Scavenger that knows how to get all the Biomoby services from a specified Biomoby Central Registry. |
| BiomobyScavengerAction | |
| BiomobyScavengerActionDialog | a dialog for helping create scavengers for BioMoby registries that are not the default registry. |
| BiomobyScavengerDialog | a dialog for helping create scavengers for BioMoby registries that are not the default registry. |
| BiomobyScavengerHelper | Helper for handling Biomoby scavengers. |
| BiomobyScavengerWorker | |
| BioMobyServiceTreeCustomRenderer | |
| BiomobyTask | |
| BiomobyTaskTest | |
| BiomobyWidgetAction | |
| BiomobyXMLHandler | Handles XML store and load for the biomoby processor. |
| CacheImpl | An implementation of CentralAll, allowing to
cache locally results of the cumulative methods so it does not need to access
Moby registry all the time. |
| ConfigureMobyServiceAction | |
| CopyOfBiomobyTask | |
| CreateMobyCollection | A local processor to construct a biomoby data packet from either an ID or a string content |
| CreateMobyData | A local processor to construct a biomoby data packet from either an ID or a string content |
| CreateMobySimple | A local processor to construct a biomoby data packet from either an ID or a string content |
| ExtractMobyData | A local processor to extract simple data types from biomoby data packets. |
| Household | This class contains some methods that used to be in the source tree of jmoby. |
| MobyObjectTreeNode | |
| MobyPanel | |
| MobyParseDatatypeProcessor | A processor that breaks up a Moby datatype into its component parts minus all the moby wrappings. |
| MobyParseDatatypeProcessorFactory | Implementation of ProcessorFactory that creates the MobyParserDatatype node |
| MobyParseDatatypeProcessorInfoBean | |
| MobyParseDatatypeScavenger | A scavenger that instantiates the Parser. |
| MobyParseDatatypeTask | A task to parse a Moby Datatype |
| MobyParseDatatypeXMLHandler | Handles XML store and load for the Moby Datatype Parser |
| MobyServiceTreeNode | |
| OverlayListener | |
| ParseMobyXML | This class is used to help parse BioMOBY messages. |
| PopupThread | |
| RetrieveWsdlThread | This class is used to create a threaded call to the Biomoby registry that retrieves WSDL for services. |
| SimpleActionFrame | This class contains some methods that are useful in creating a consistent JPanel for displaying information or actions for biomoby services and datatypes. |
| TreeUtils | This class contains some methods that are useful in creating a Datatypes tree from an input stream of RDF |
| XMLUtilities | |
| XMLUtilitiesTest | |
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