Package org.biomoby.client.taverna.plugin

Class Summary
AddParserAction An action to add a parser from within the Workflow editor
BiomobyAction  
BiomobyObjectAction  
BiomobyObjectProcessor  
BiomobyObjectProcessorFactory  
BiomobyObjectProcessorInfoBean Provides information about the BiomobyObject Processor plugin, using taverna.properties, identified by the tag 'biomobyobject'
BiomobyObjectScavenger Deprecated.  
BiomobyObjectScavengerHelper Deprecated.  
BiomobyObjectTask  
BiomobyObjectTaskTest  
BioMobyObjectTreeCustomRenderer  
BiomobyObjectXMLHandler  
BiomobyParserProcessorTest  
BiomobyProcessor A processor based on the Biomoby compliant web services.
BiomobyProcessorFactory Implementation of ProcessorFactory that creates BiomobyProcessor nodes.
BiomobyProcessorInfoBean Provides information about the Biomoby Processor plugin, using taverna.properties, identified by the tag 'biomobywsdl'
BiomobyProcessorTest  
BiomobyScavenger A Scavenger that knows how to get all the Biomoby services from a specified Biomoby Central Registry.
BiomobyScavengerAction  
BiomobyScavengerActionDialog a dialog for helping create scavengers for BioMoby registries that are not the default registry.
BiomobyScavengerDialog a dialog for helping create scavengers for BioMoby registries that are not the default registry.
BiomobyScavengerHelper Helper for handling Biomoby scavengers.
BiomobyScavengerWorker  
BioMobyServiceTreeCustomRenderer  
BiomobyTask  
BiomobyTaskTest  
BiomobyWidgetAction  
BiomobyXMLHandler Handles XML store and load for the biomoby processor.
CacheImpl An implementation of CentralAll, allowing to cache locally results of the cumulative methods so it does not need to access Moby registry all the time.
ConfigureMobyServiceAction  
CopyOfBiomobyTask  
CreateMobyCollection A local processor to construct a biomoby data packet from either an ID or a string content
CreateMobyData A local processor to construct a biomoby data packet from either an ID or a string content
CreateMobySimple A local processor to construct a biomoby data packet from either an ID or a string content
ExtractMobyData A local processor to extract simple data types from biomoby data packets.
Household This class contains some methods that used to be in the source tree of jmoby.
MobyObjectTreeNode  
MobyPanel  
MobyParseDatatypeProcessor A processor that breaks up a Moby datatype into its component parts minus all the moby wrappings.
MobyParseDatatypeProcessorFactory Implementation of ProcessorFactory that creates the MobyParserDatatype node
MobyParseDatatypeProcessorInfoBean  
MobyParseDatatypeScavenger A scavenger that instantiates the Parser.
MobyParseDatatypeTask A task to parse a Moby Datatype
MobyParseDatatypeXMLHandler Handles XML store and load for the Moby Datatype Parser
MobyServiceTreeNode  
OverlayListener  
ParseMobyXML This class is used to help parse BioMOBY messages.
PopupThread  
RetrieveWsdlThread This class is used to create a threaded call to the Biomoby registry that retrieves WSDL for services.
SimpleActionFrame This class contains some methods that are useful in creating a consistent JPanel for displaying information or actions for biomoby services and datatypes.
TreeUtils This class contains some methods that are useful in creating a Datatypes tree from an input stream of RDF
XMLUtilities  
XMLUtilitiesTest