net.sourceforge.taverna.scuflworkers.ncbi
Class EntrezGeneWorker

java.lang.Object
  extended by net.sourceforge.taverna.scuflworkers.ncbi.AbstractNCBIWorker
      extended by net.sourceforge.taverna.scuflworkers.ncbi.EntrezGeneWorker
All Implemented Interfaces:
LocalWorker

public class EntrezGeneWorker
extends AbstractNCBIWorker

This processor is responsible for fetching an Entrez Gene record in XML format. It can also transform the resulting XML document.

Version:
$Revision: 1.2 $
Author:
mfortner

Field Summary
 
Fields inherited from class net.sourceforge.taverna.scuflworkers.ncbi.AbstractNCBIWorker
NEWLINE
 
Fields inherited from interface org.embl.ebi.escience.scuflworkers.java.LocalWorker
BINARY, BINARY_ARRAY, HTML, HTML_ARRAY, PNG_IMAGE, PNG_IMAGE_ARRAY, STRING, STRING_ARRAY, UNTYPED, UNTYPED_ARRAY
 
Constructor Summary
EntrezGeneWorker()
           
 
Method Summary
 java.util.Map execute(java.util.Map inputMap)
          This is the main method of the class.
 
Methods inherited from class net.sourceforge.taverna.scuflworkers.ncbi.AbstractNCBIWorker
inputNames, inputTypes, outputNames, outputTypes, setStreamProcessor
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

EntrezGeneWorker

public EntrezGeneWorker()
Method Detail

execute

public java.util.Map execute(java.util.Map inputMap)
                      throws TaskExecutionException
Description copied from class: AbstractNCBIWorker
This is the main method of the class.

Specified by:
execute in interface LocalWorker
Specified by:
execute in class AbstractNCBIWorker
Parameters:
inputMap - A map of values to be used by the worker class.
Throws:
TaskExecutionException - thrown if there is an error during invocation of the task.